SangerRead Level

Basic Information:

  • Output Directory : /Users/angelovangel/code/tracer/Chow52387_CMV-F_pCDNA-RHGB1-GFP-1_Plasmid_41_A06
  • Input Directory : testdata/CA0006649
  • Input Filename : Chow52387_CMV-F_pCDNA-RHGB1-GFP-1_Plasmid_41_A06.ab1
  • Read Feature : Forward Read

DNA Seqence

Primary Sequence

Secondary Sequence

Phred Quality Scores

Amino Acids Sequence

Amino Acids Sequence frameshit 0

Amino Acids Sequence frameshit 1

Amino Acids Sequence frameshit 2

Quality Trimming

  • Trimming Method: Method 1 ‘Logarithmic Scale Trimming’
  • M1 Trimming Cutoff: 1e-04
  • Raw Sequence Length: 1374
  • Trimmed Sequence Length: 658
  • Trimmed Start Point: 35
  • Trimmed End Point: 693
  • Raw Mean Quality Score: 37.849345
  • Trimmed Mean Quality Score: 54.0364742
  • Raw Min Quality Score: 1
  • Trimmed Min Quality Score: 18
  • Remaining Read Ratio: 47.89 %

Chromatogram

  • Signal Ratio Cutoff: 0.33
  • Base Number Per Row: 100
  • Height Per Row: 200
  • Show Trimmed Region: TRUE 
## Chromatogram saved to /Users/angelovangel/code/tracer/Chow52387_CMV-F_pCDNA-RHGB1-GFP-1_Plasmid_41_A06/Chromatogram.pdf in the current working directory

Click Here to Open Chromatogram in New Page